STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042089DEAD (Asp-Glu-Ala-Asp) box helicase 21. (696 aa)    
Predicted Functional Partners:
ENSNMLP00000010480
Pescadillo.
   
 0.981
ENSNMLP00000031591
WD repeat domain 12.
   
 0.979
ENSNMLP00000010221
NSA2 ribosome biogenesis homolog (S. cerevisiae).
   
 0.967
ENSNMLP00000032283
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
  
0.965
ENSNMLP00000017041
EBNA1 binding protein 2.
   
 0.964
ENSNMLP00000001724
Ribosomal L24 domain containing 1.
   
 0.962
ENSNMLP00000002795
FtsJ RNA 2'-O-methyltransferase 3.
  
 0.961
ENSNMLP00000039177
Guanine nucleotide binding protein-like 2 (nucleolar).
  
 0.961
ENSNMLP00000014457
Drosha ribonuclease III.
  
 0.957
ENSNMLP00000020260
Splicing factor 3b, subunit 1.
   
 0.957
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.