STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042188F-box protein 4. (293 aa)    
Predicted Functional Partners:
ENSNMLP00000013916
S-phase kinase-associated protein 1.
    
 0.985
ENSNMLP00000015878
Cullin 1a.
    
 0.969
ENSNMLP00000017936
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
     
 0.889
ENSNMLP00000029725
F-box and WD repeat domain containing 11a.
     
 0.852
ENSNMLP00000041210
Si:ch211-154o6.3.
    
 0.831
CUL3
Cullin 3.
    
 0.816
ENSNMLP00000030280
Cullin 3b.
    
 0.816
ENSNMLP00000028160
F-box and WD repeat domain containing 8.
    
 0.793
ENSNMLP00000005029
CDK2 associated cullin domain 1.
    
 0.772
ENSNMLP00000003423
annotation not available
    
 0.752
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.