STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042201Serine/arginine repetitive matrix 4. (399 aa)    
Predicted Functional Partners:
ENSNMLP00000007714
Malate synthase-like.
   
 
 0.894
ENSNMLP00000032341
Si:dkey-15b23.3.
    
 0.676
ENSNMLP00000001726
Mex-3 RNA binding family member B.
    
 0.601
ENSNMLP00000023958
annotation not available
    
 0.597
ENSNMLP00000026185
Myosin VIb.
    
 0.597
ENSNMLP00000020986
Wolfram syndrome 1b (wolframin).
      
 0.562
SLC26A5
Solute carrier family 26 member 5.
      
 0.551
ENSNMLP00000014795
Aurora kinase A.
   
 0.546
ENSNMLP00000006639
Polo-like kinase 3 (Drosophila).
    
 0.528
PLK1
Polo like kinase 1.
    
 0.528
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.