STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042304Zinc finger DHHC-type containing 17. (639 aa)    
Predicted Functional Partners:
ENSNMLP00000032391
General transcription factor IIH, polypeptide 4.
   
 
  0.775
ENSNMLP00000021906
Palmitoyl-protein thioesterase 1 (ceroid-lipofuscinosis, neuronal 1, infantile).
      
 0.553
ENSNMLP00000035786
AFG1 like ATPase b.
 
      0.551
ENSNMLP00000031024
Zinc finger DHHC-type containing 24.
      
0.537
ENSNMLP00000003483
Syntaxin 17.
    
 
 0.516
ENSNMLP00000003681
annotation not available
      
 0.511
ENSNMLP00000028906
Zinc finger DHHC-type containing 4.
      
 0.499
ENSNMLP00000017791
Zinc finger DHHC-type containing 21.
      
0.495
ENSNMLP00000005392
Zinc finger DHHC-type containing 7.
      
0.493
ENSNMLP00000036271
TraB domain containing.
      
 0.470
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.