STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042364Heterogeneous nuclear ribonucleoprotein A/Ba. (328 aa)    
Predicted Functional Partners:
ENSNMLP00000017533
Heterogeneous nuclear ribonucleoprotein K.
   
 0.842
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.823
ENSNMLP00000004326
Poly A binding protein, cytoplasmic 1 b.
   
0.800
ENSNMLP00000027338
poly(A) binding protein, cytoplasmic 1a.
   
0.800
ENSNMLP00000021277
Heterogeneous nuclear ribonucleoprotein C.
   
 0.788
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.767
ENSNMLP00000043978
Serine and arginine rich splicing factor 3a.
   
 0.740
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
   
 0.738
YTHDC2
YTH domain containing 2.
   
 0.713
ENSNMLP00000001079
Ribosomal protein S27a.
   
  0.710
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.