STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042757WD repeat domain 76. (293 aa)    
Predicted Functional Partners:
ENSNMLP00000022528
Damage-specific DNA binding protein 1.
    
 0.988
ENSNMLP00000008767
Cullin 4B.
    
 0.950
ENSNMLP00000023525
Cullin 4A.
    
 0.950
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.944
ENSNMLP00000029721
Ring finger protein 7.
    
 0.944
ENSNMLP00000026678
Chromodomain helicase DNA binding protein 1-like.
   
 0.928
SMARCA5
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5.
   
 0.928
ENSNMLP00000004466
Xeroderma pigmentosum, complementation group C.
   
 0.921
ENSNMLP00000005952
DET1 partner of COP1 E3 ubiquitin ligase.
     
 0.899
ENSNMLP00000043117
Excision repair cross-complementation group 8.
    
 0.899
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.