STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000042780ISL LIM homeobox 2a. (341 aa)    
Predicted Functional Partners:
LHX3
LIM homeobox 3.
   
0.842
ENSNMLP00000014502
LIM homeobox 4.
   
0.832
ENSNMLP00000017180
LIM-domain binding 1b.
    
 0.815
ENSNMLP00000041025
LIM domain binding 2a.
    
 0.815
ENSNMLP00000011526
LIM domain binding 1a.
    
 0.777
ENSNMLP00000035297
Achaete-scute family bHLH transcription factor 1a.
   
 0.610
ENSNMLP00000004176
Pancreas associated transcription factor 1a.
   
 0.560
GATA2
GATA binding protein 2.
   
 0.553
ENSNMLP00000030514
GATA binding protein 3.
   
 0.553
ENSNMLP00000035392
GATA binding protein 2a.
   
 0.553
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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