STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043117Excision repair cross-complementation group 8. (401 aa)    
Predicted Functional Partners:
ENSNMLP00000022528
Damage-specific DNA binding protein 1.
    
 0.998
ENSNMLP00000023525
Cullin 4A.
    
 0.988
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.987
ENSNMLP00000008767
Cullin 4B.
    
 0.981
ENSNMLP00000021429
Polymerase (RNA) II (DNA directed) polypeptide A.
    
 0.969
ENSNMLP00000021600
Polymerase (RNA) II (DNA directed) polypeptide I.
    
 0.955
ENSNMLP00000001346
Info polymerase (RNA) II (DNA directed) polypeptide H.
    
  0.951
ENSNMLP00000004103
annotation not available
    
  0.951
ENSNMLP00000005080
Polymerase (RNA) II (DNA directed) polypeptide D.
    
  0.951
ENSNMLP00000005160
Polymerase (RNA) II (DNA directed) polypeptide B.
    
  0.951
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.