STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043265Lactamase, beta-like 1b. (512 aa)    
Predicted Functional Partners:
ENSNMLP00000007714
Malate synthase-like.
  
 
  0.818
ENSNMLP00000003663
Cytochrome b5 reductase 4.
   
 0.812
ENSNMLP00000029097
Glomulin, FKBP associated protein a.
   
  0.671
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.670
ENSNMLP00000014583
Ribosomal protein S6.
   
  0.623
ENSNMLP00000017669
FCF1 rRNA-processing protein.
    
  0.621
ENSNMLP00000034946
Ribosomal protein S7.
    
  0.621
ENSNMLP00000037371
EMG1 N1-specific pseudouridine methyltransferase.
    
  0.621
ENSNMLP00000039165
UTP11 small subunit processome component.
    
  0.621
ENSNMLP00000044995
Ddb1 and cul4 associated factor 13.
    
  0.621
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.