STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043300REX1, RNA exonuclease 1 homolog. (1231 aa)    
Predicted Functional Partners:
ENSNMLP00000000623
Small fragment nuclease.
  
 0.937
ENSNMLP00000017739
poly(A) specific ribonuclease subunit PAN3.
    
 0.929
ENSNMLP00000019496
Proliferating cell nuclear antigen.
  
 0.914
REXO5
RNA exonuclease 5.
     
0.844
ENSNMLP00000001561
DNA topoisomerase II alpha.
    
 0.832
ENSNMLP00000040815
Mediator complex subunit 6.
   
  0.801
ENSNMLP00000034534
F-box DNA helicase 1.
  
 
 0.783
ENSNMLP00000020097
Mediator of RNA polymerase II transcription, subunit 18 homolog (yeast).
     
 0.763
ENSNMLP00000007854
Mediator complex subunit 14.
   
 
  0.761
ENSNMLP00000006368
Guanine monophosphate synthase.
  
 
 0.748
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.