STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP000000434734-hydroxyphenylpyruvate dioxygenase b. (393 aa)    
Predicted Functional Partners:
ENSNMLP00000038217
Homogentisate 1,2-dioxygenase.
  
 0.990
ENSNMLP00000040844
Tyrosine aminotransferase.
   
 
 0.954
ENSNMLP00000017330
Si:ch211-198n5.11.
  
 
 0.937
ENSNMLP00000043308
propionyl-CoA carboxylase subunit beta.
  
 
 0.937
ENSNMLP00000036910
Glutamic-oxaloacetic transaminase 2b, mitochondrial.
  
 
 0.907
ENSNMLP00000016467
Si:ch211-153b23.3.
  
 
 0.897
ENSNMLP00000038692
Aminoadipate aminotransferase.
  
 
 0.878
ENSNMLP00000025286
methylcrotonoyl-CoA carboxylase 1 (alpha).
  
 
 0.866
ENSNMLP00000034244
propionyl-CoA carboxylase subunit alpha.
  
 
 0.866
ENSNMLP00000040577
Negative elongation factor complex member C/D.
  
 
 0.866
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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