STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043572GTPase activating protein and VPS9 domains 1. (1468 aa)    
Predicted Functional Partners:
ENSNMLP00000018547
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.908
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
   
 0.908
ENSNMLP00000008246
RAB5C, member RAS oncogene family.
    
 0.884
ENSNMLP00000009997
RAB5A, member RAS oncogene family, b.
    
 0.884
ENSNMLP00000014277
annotation not available
    
 0.884
RAB17
RAB17, member RAS oncogene family.
    
 0.884
ENSNMLP00000022016
RAB5A, member RAS oncogene family, a.
    
 0.884
ENSNMLP00000032415
RAB5B, member RAS oncogene family.
    
 0.884
ENSNMLP00000022087
Rabaptin, RAB GTPase binding effector protein 2.
    
 0.881
ENSNMLP00000031051
RAB21, member RAS oncogene family.
   
 0.857
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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