STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043679Nuclear receptor subfamily 2, group F, member 6b. (388 aa)    
Predicted Functional Partners:
TADA1
Transcriptional adaptor 1.
    
 0.756
ENSNMLP00000022737
Mediator complex subunit 1.
    
  0.684
ENSNMLP00000036038
Heat shock protein 90, beta (grp94), member 1.
   
 0.599
ENSNMLP00000045074
Peroxisome proliferator-activated receptor gamma, coactivator 1 alpha.
    
 0.578
ENSNMLP00000017303
Si:dkey-93h22.8.
    
 0.561
ENSNMLP00000043617
Anoctamin 8b.
      
 0.551
ENSNMLP00000007854
Mediator complex subunit 14.
    
  0.547
ENSNMLP00000012818
Anoctamin 8a.
      
 0.544
ENSNMLP00000015658
annotation not available
    
 0.543
ENSNMLP00000024032
annotation not available
    
  0.539
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.