STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043689WD repeat domain 21. (418 aa)    
Predicted Functional Partners:
ENSNMLP00000022528
Damage-specific DNA binding protein 1.
    
 0.992
ENSNMLP00000023525
Cullin 4A.
    
 0.957
ENSNMLP00000008209
Ddb1 and cul4 associated factor 5.
     
 0.932
ENSNMLP00000031902
Ddb1 and cul4 associated factor 6.
     
 0.932
ENSNMLP00000008767
Cullin 4B.
    
 0.931
ENSNMLP00000010334
Damage-specific DNA binding protein 2.
     
 0.924
ENSNMLP00000037000
DDB1 and CUL4 associated factor 8.
     
 0.920
ENSNMLP00000019328
Ddb1 and cul4 associated factor 11.
     
 0.902
ENSNMLP00000027706
WD repeat domain 32.
     
 0.897
ENSNMLP00000025944
DDB1 and CUL4 associated factor 15.
    
 0.883
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.