STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000043770SEC24 homolog C, COPII coat complex component. (1295 aa)    
Predicted Functional Partners:
ENSNMLP00000035805
SEC13 homolog, nuclear pore and COPII coat complex component.
   
 0.995
ENSNMLP00000038717
SEC23 homolog B, coat complex II component.
   
 0.990
ENSNMLP00000010543
annotation not available
   
0.988
ENSNMLP00000018029
annotation not available
   
 0.982
ENSNMLP00000045056
SEC24 homolog D, COPII coat complex component.
  
0.971
ENSNMLP00000015327
SEC31 homolog A, COPII coat complex component.
   
 0.968
ENSNMLP00000005455
SEC24 homolog B, COPII coat complex component.
   
0.967
ENSNMLP00000011066
annotation not available
   
0.967
ENSNMLP00000016767
SEC31 homolog B, COPII coat complex component.
   
 0.961
ENSNMLP00000038778
Si:dkey-13n15.2.
  
  
 
0.852
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.