STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000044256RAD54 homolog B. (917 aa)    
Predicted Functional Partners:
ENSNMLP00000002406
RAD51 recombinase.
  
 0.961
ENSNMLP00000001382
annotation not available
   
 0.956
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 0.951
ENSNMLP00000031101
annotation not available
   
 0.932
ENSNMLP00000036843
annotation not available
   
 0.932
ENSNMLP00000018040
annotation not available
   
 0.900
ENSNMLP00000002621
RAD51 paralog D.
  
 0.873
ENSNMLP00000044784
Helicase-like transcription factor.
  
0.868
ENSNMLP00000019280
annotation not available
   
 0.867
ENSNMLP00000005581
annotation not available
  
 
 0.861
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.