STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000044426annotation not available (110 aa)    
Predicted Functional Partners:
ENSNMLP00000027354
Serine/arginine repetitive matrix 1.
   
 
 0.682
ENSNMLP00000011373
Cilia and flagella associated protein 20.
    
   0.601
ENSNMLP00000021060
Splicing factor 3a, subunit 3.
      
 0.560
ENSNMLP00000025913
Splicing factor 3a, subunit 2.
      
 0.534
ENSNMLP00000015917
BLOC-1 related complex subunit 8.
      
 0.504
ENSNMLP00000042201
Serine/arginine repetitive matrix 4.
      
 0.452
ENSNMLP00000018912
Cramped chromatin regulator homolog 1.
   
  
 0.435
ENSNMLP00000011891
annotation not available
      
 0.416
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.