STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP4Plakophilin 4. (1154 aa)    
Predicted Functional Partners:
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.924
ENSNMLP00000020112
Catenin (cadherin-associated protein), alpha 1.
   
 0.879
ENSNMLP00000027198
Catenin (cadherin-associated protein), alpha 2.
   
 0.879
ENSNMLP00000018317
MET proto-oncogene, receptor tyrosine kinase.
   
 0.848
ENSNMLP00000033544
Macrophage stimulating 1 receptor a.
   
 0.848
ENSNMLP00000039562
annotation not available
   
 0.848
ENSNMLP00000000632
annotation not available
    
 0.829
ENSNMLP00000008892
annotation not available
   
 0.807
ENSNMLP00000023688
Junction plakoglobin a.
   
 0.807
ENSNMLP00000011306
annotation not available
    
 0.806
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.