STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000044764PHD finger protein 14. (985 aa)    
Predicted Functional Partners:
ENSNMLP00000035436
High mobility group 20A.
   
 
 0.826
ENSNMLP00000011474
Bromodomain and PHD finger containing, 3a.
   
 
0.810
ENSNMLP00000013824
Bromodomain and PHD finger containing, 3b.
   
 
0.810
ENSNMLP00000010585
Bromodomain containing 1b.
   
 
0.795
ENSNMLP00000021633
Bromodomain and PHD finger containing, 1.
   
 
0.795
ENSNMLP00000026014
Bromodomain containing 1a.
   
 
0.795
ENSNMLP00000023142
annotation not available
    
 0.622
ENSNMLP00000023148
K(lysine) acetyltransferase 6A.
    
 0.622
ENSNMLP00000012841
annotation not available
    
  0.603
ENSNMLP00000019663
K(lysine) acetyltransferase 7b.
    
  0.603
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.