Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KZX16655.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
KZX16654.1
Hypothetical protein.
       0.773
KZX16656.1
Baseplate J-like protein.
       0.773
KZX16657.1
Hypothetical protein.
       0.773
KZX16653.1
Prophage endopeptidase tail.
       0.762
KZX16658.1
Hypothetical protein.
       0.752
KZX16659.1
Hypothetical protein.
       0.752
KZX16660.1
Hypothetical protein.
       0.752
KZX16652.1
Putative peptidoglycan binding domain protein.
       0.736
KZX16661.1
Hypothetical protein.
       0.730
KZX16651.1
Hypothetical protein.
       0.715
Your Current Organism:
Methanobrevibacter cuticularis
NCBI taxonomy Id: 47311
Other names: DSM 11139, M. cuticularis, strain RFM-1
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