Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
copA_1Putative copper-importing P-type ATPase A. (263 aa)    
Predicted Functional Partners:
KZX16347.1
Hypothetical protein; Belongs to the UPF0288 family.
 
     0.773
KZX17687.1
Methyl-coenzyme M reductase operon protein C.
 
     0.766
KZX16333.1
Hypothetical protein.
 
     0.725
KZX16345.1
Hypothetical protein.
 
     0.724
opuCA
Glycine betaine/carnitine/choline transport ATP-binding protein OpuCA.
 
     0.702
fldI
R-phenyllactate dehydratase activator.
 
     0.693
KZX17242.1
Radical SAM superfamily protein.
  
     0.666
KZX16346.1
Hypothetical protein.
 
     0.660
KZX17026.1
Hypothetical protein.
  
     0.655
mtrC
Tetrahydromethanopterin S-methyltransferase subunit C; Part of a complex that catalyzes the formation of methyl- coenzyme M and tetrahydromethanopterin from coenzyme M and methyl- tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step.
  
     0.654
Your Current Organism:
Methanobrevibacter cuticularis
NCBI taxonomy Id: 47311
Other names: DSM 11139, M. cuticularis, strain RFM-1
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