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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KZX16502.1Lineage-specific thermal regulator protein. (162 aa)    
Predicted Functional Partners:
drrA_1
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  
 0.799
ybhR
Inner membrane transport permease YbhR.
     
 0.669
bamB
Outer membrane protein assembly factor BamB precursor.
       0.562
drrA_2
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
  
  
 0.446
thrC
Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.
    
  0.437
rpoL
DNA-directed RNA polymerase subunit L; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoL/eukaryotic RPB11/RPC19 RNA polymerase subunit family.
   
   0.432
KZX17772.1
Translation initiation factor Sui1; Belongs to the SUI1 family.
    
   0.431
dbpA_2
ATP-dependent RNA helicase DbpA.
    
   0.431
KZX16129.1
D-xylulose reductase.
    
  0.426
adh
NADP-dependent isopropanol dehydrogenase.
    
  0.426
Your Current Organism:
Methanobrevibacter cuticularis
NCBI taxonomy Id: 47311
Other names: DSM 11139, M. cuticularis, strain RFM-1
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