Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
KZX16165.1 | KZX16508.1 | MBCUT_10310 | MBCUT_08100 | Hypothetical protein. | Hypothetical protein. | 0.563 |
KZX16165.1 | acsC | MBCUT_10310 | MBCUT_14850 | Hypothetical protein. | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | 0.478 |
KZX16165.1 | acsD | MBCUT_10310 | MBCUT_14860 | Hypothetical protein. | Corrinoid/iron-sulfur protein small subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex. Belongs to the CdhD family. | 0.625 |
KZX16165.1 | cdhB | MBCUT_10310 | MBCUT_14890 | Hypothetical protein. | acetyl-CoA decarbonylase/synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD-mediated CO oxidation. Belongs to the CdhB family. | 0.705 |
KZX16165.1 | cdhC | MBCUT_10310 | MBCUT_14880 | Hypothetical protein. | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex); Belongs to the CdhC family. | 0.489 |
KZX16165.1 | dcd_2 | MBCUT_10310 | MBCUT_06310 | Hypothetical protein. | Deoxycytidine triphosphate deaminase. | 0.563 |
KZX16165.1 | ndhI_7 | MBCUT_10310 | MBCUT_14900 | Hypothetical protein. | NAD(P)H-quinone oxidoreductase subunit I; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.676 |
KZX16165.1 | nifH | MBCUT_10310 | MBCUT_03220 | Hypothetical protein. | Nitrogenase iron protein. | 0.413 |
KZX16165.1 | thyA | MBCUT_10310 | MBCUT_04340 | Hypothetical protein. | Thymidylate synthase. | 0.432 |
KZX16165.1 | tmk | MBCUT_10310 | MBCUT_15880 | Hypothetical protein. | Thymidylate kinase. | 0.521 |
KZX16508.1 | KZX16165.1 | MBCUT_08100 | MBCUT_10310 | Hypothetical protein. | Hypothetical protein. | 0.563 |
KZX16508.1 | cdhB | MBCUT_08100 | MBCUT_14890 | Hypothetical protein. | acetyl-CoA decarbonylase/synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD-mediated CO oxidation. Belongs to the CdhB family. | 0.433 |
acsC | KZX16165.1 | MBCUT_14850 | MBCUT_10310 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | Hypothetical protein. | 0.478 |
acsC | acsD | MBCUT_14850 | MBCUT_14860 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | Corrinoid/iron-sulfur protein small subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex. Belongs to the CdhD family. | 0.999 |
acsC | cdhB | MBCUT_14850 | MBCUT_14890 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | acetyl-CoA decarbonylase/synthase complex subunit epsilon; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD-mediated CO oxidation. Belongs to the CdhB family. | 0.978 |
acsC | cdhC | MBCUT_14850 | MBCUT_14880 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | Carbon monoxide dehydrogenase/acetyl-CoA synthase subunit alpha; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex); Belongs to the CdhC family. | 0.998 |
acsC | ndhI_7 | MBCUT_14850 | MBCUT_14900 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | NAD(P)H-quinone oxidoreductase subunit I; Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. | 0.997 |
acsC | nifH | MBCUT_14850 | MBCUT_03220 | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | Nitrogenase iron protein. | 0.871 |
acsD | KZX16165.1 | MBCUT_14860 | MBCUT_10310 | Corrinoid/iron-sulfur protein small subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex. Belongs to the CdhD family. | Hypothetical protein. | 0.625 |
acsD | acsC | MBCUT_14860 | MBCUT_14850 | Corrinoid/iron-sulfur protein small subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). Probably maintains the overall quaternary structure of the ACDS complex. Belongs to the CdhD family. | Corrinoid/iron-sulfur protein large subunit; Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). | 0.999 |
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