STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhANAD(P)-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (419 aa)    
Predicted Functional Partners:
pdhD
Dihydrolipoyl dehydrogenase.
  
 
 0.982
KZX15312.1
2-oxoglutaramate amidase.
  
 
 0.979
glnA
Glutamine synthetase.
  
 
 0.976
gltB
Ferredoxin-dependent glutamate synthase 1; Belongs to the glutamate synthase family.
  
 0.975
KZX16834.1
Aspartate aminotransferase.
  
 
 0.968
korA_2
2-oxoglutarate oxidoreductase subunit KorA.
  
 
 0.967
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
   
 0.967
korB_2
2-oxoglutarate oxidoreductase subunit KorB.
    
 0.966
accC
Biotin carboxylase.
   
 0.965
padE_2
NADH-dependent phenylglyoxylate dehydrogenase subunit gamma.
  
 
 0.965
Your Current Organism:
Methanobrevibacter cuticularis
NCBI taxonomy Id: 47311
Other names: DSM 11139, M. cuticularis, strain RFM-1
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