STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ64341.1Proteins of 100 residues with WXG; Belongs to the WXG100 family. (97 aa)    
Predicted Functional Partners:
SDQ64316.1
WXG100 family type VII secretion target; Belongs to the WXG100 family.
  
 
 0.999
SDR20546.1
Hypothetical protein.
   
 
 0.789
SDR27663.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.789
SDQ83936.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
   
 
 0.782
SDQ64289.1
EspG family protein.
     
 0.622
SDQ64265.1
PPE family protein.
     
 0.498
SDQ64241.1
PE family protein.
       0.497
SDQ73211.1
HSP20 family protein; Belongs to the small heat shock protein (HSP20) family.
      
 0.412
SDQ62672.1
Hypothetical protein.
  
 
 0.411
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.