STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ87323.1NADPH2:quinone reductase. (330 aa)    
Predicted Functional Partners:
SDQ61278.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A.
 
 0.985
SDQ61352.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 0.985
SDQ61303.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B.
 
 0.983
SDR28242.1
Mycolic acid condensase.
 
 0.978
SDQ61328.1
Ketoacyl-synthetase C-terminal extension.
 
 0.977
SDQ61378.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E.
 
 0.977
SDR10447.1
Acyl transferase domain-containing protein.
 
  
  0.922
SDQ75046.1
Acyl transferase domain-containing protein; Manually curated.
 
   
  0.900
SDQ61245.1
Long chain fatty acid CoA FadD26.
 
   
  0.746
SDQ87351.1
Acetoacetate decarboxylase (ADC).
    
  0.740
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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