STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ89340.1Amino acid ABC transporter membrane protein, PAAT family. (324 aa)    
Predicted Functional Partners:
SDQ89306.1
Polar amino acid transport system ATP-binding protein.
 0.997
SDR23171.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.995
SDQ84544.1
L-glutamate ABC transporter ATP-binding protein.
 0.988
SDQ91133.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.988
SDR06232.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 0.983
SDQ89275.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.958
SDQ91109.1
Polar amino acid transport system substrate-binding protein.
 0.894
SDR06252.1
Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.
 
0.857
SDQ84467.1
Glutamate transport system permease protein.
 
  
 
0.816
SDQ54806.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 
 0.815
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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