STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ90718.1Enterochelin esterase. (393 aa)    
Predicted Functional Partners:
SDQ56393.1
Nonribosomal peptide synthetase DhbF; Non-canonical start codon; manually curated.
  
 0.845
SDQ47539.1
Daunorubicin resistance ABC transporter ATP-binding subunit.
 
  
 0.834
SDQ56584.1
Bifunctional isochorismate lyase / aryl carrier protein.
 
  
 0.807
SDQ90743.1
Hypothetical protein.
       0.773
SDQ61352.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
 
 
 0.768
SDR21671.1
Endo-1,4-beta-xylanase (glycosyl hydrolase family 10).
  
 
 0.748
SDQ56326.1
Aryl carrier domain-containing protein.
 
  
 0.739
SDQ61278.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A.
  
 
 0.739
SDR27104.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein/thioester reductase domain-containing protein.
 
  
 0.739
SDQ66543.1
Hypothetical protein.
    
   0.734
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.