STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDQ95950.1Arsenate-mycothiol transferase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (140 aa)    
Predicted Functional Partners:
SDQ95967.1
Arsenite transporter, ACR3 family.
 
  
 0.839
SDQ95986.1
Hypothetical protein.
       0.773
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.601
SDQ72066.1
Putative thioredoxin.
  
 
 0.562
SDQ96005.1
Transcriptional regulator, ArsR family.
  
  
 0.561
SDQ39424.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.551
SDR02677.1
Thioredoxin; Belongs to the thioredoxin family.
  
 
 0.551
SDQ08544.1
Deoxyribodipyrimidine photo-lyase; Belongs to the DNA photolyase family.
    
   0.539
truA
tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
    
   0.539
SDQ98350.1
Long-chain alpha-pyrone synthase.
    
   0.539
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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