Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDQ44626.1 | SDR02924.1 | SAMN04489765_0442 | SAMN04489765_2843 | Cysteine desulfurase family protein, VC1184 subfamily; Manually curated. | FeS assembly scaffold apoprotein IscU. | 0.963 |
SDQ44626.1 | SDR02964.1 | SAMN04489765_0442 | SAMN04489765_2845 | Cysteine desulfurase family protein, VC1184 subfamily; Manually curated. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.886 |
SDQ44626.1 | SDR02983.1 | SAMN04489765_0442 | SAMN04489765_2846 | Cysteine desulfurase family protein, VC1184 subfamily; Manually curated. | Fe-S cluster assembly protein SufD. | 0.874 |
SDQ44626.1 | SDR03002.1 | SAMN04489765_0442 | SAMN04489765_2847 | Cysteine desulfurase family protein, VC1184 subfamily; Manually curated. | Iron-regulated ABC transporter membrane component SufB. | 0.882 |
SDR02884.1 | SDR02906.1 | SAMN04489765_2841 | SAMN04489765_2842 | Hypothetical protein. | Metal-sulfur cluster biosynthetic enzyme. | 0.752 |
SDR02884.1 | SDR02924.1 | SAMN04489765_2841 | SAMN04489765_2843 | Hypothetical protein. | FeS assembly scaffold apoprotein IscU. | 0.752 |
SDR02884.1 | SDR02946.1 | SAMN04489765_2841 | SAMN04489765_2844 | Hypothetical protein. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.752 |
SDR02884.1 | SDR02964.1 | SAMN04489765_2841 | SAMN04489765_2845 | Hypothetical protein. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.752 |
SDR02884.1 | SDR02983.1 | SAMN04489765_2841 | SAMN04489765_2846 | Hypothetical protein. | Fe-S cluster assembly protein SufD. | 0.711 |
SDR02884.1 | SDR03002.1 | SAMN04489765_2841 | SAMN04489765_2847 | Hypothetical protein. | Iron-regulated ABC transporter membrane component SufB. | 0.711 |
SDR02884.1 | SDR03020.1 | SAMN04489765_2841 | SAMN04489765_2848 | Hypothetical protein. | Predicted transcriptional regulator, ArsR family. | 0.711 |
SDR02906.1 | SDR02884.1 | SAMN04489765_2842 | SAMN04489765_2841 | Metal-sulfur cluster biosynthetic enzyme. | Hypothetical protein. | 0.752 |
SDR02906.1 | SDR02924.1 | SAMN04489765_2842 | SAMN04489765_2843 | Metal-sulfur cluster biosynthetic enzyme. | FeS assembly scaffold apoprotein IscU. | 0.994 |
SDR02906.1 | SDR02946.1 | SAMN04489765_2842 | SAMN04489765_2844 | Metal-sulfur cluster biosynthetic enzyme. | Cysteine desulfurase / selenocysteine lyase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine. | 0.929 |
SDR02906.1 | SDR02964.1 | SAMN04489765_2842 | SAMN04489765_2845 | Metal-sulfur cluster biosynthetic enzyme. | Iron-regulated ABC transporter ATPase subunit SufC. | 0.966 |
SDR02906.1 | SDR02983.1 | SAMN04489765_2842 | SAMN04489765_2846 | Metal-sulfur cluster biosynthetic enzyme. | Fe-S cluster assembly protein SufD. | 0.949 |
SDR02906.1 | SDR03002.1 | SAMN04489765_2842 | SAMN04489765_2847 | Metal-sulfur cluster biosynthetic enzyme. | Iron-regulated ABC transporter membrane component SufB. | 0.958 |
SDR02906.1 | SDR03020.1 | SAMN04489765_2842 | SAMN04489765_2848 | Metal-sulfur cluster biosynthetic enzyme. | Predicted transcriptional regulator, ArsR family. | 0.808 |
SDR02906.1 | SDR25446.1 | SAMN04489765_2842 | SAMN04489765_4261 | Metal-sulfur cluster biosynthetic enzyme. | Selenocysteine lyase/Cysteine desulfurase. | 0.564 |
SDR02924.1 | SDQ44626.1 | SAMN04489765_2843 | SAMN04489765_0442 | FeS assembly scaffold apoprotein IscU. | Cysteine desulfurase family protein, VC1184 subfamily; Manually curated. | 0.963 |
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