STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR06193.1Protein of unknown function; Exonuclease that cleaves single-stranded 3' overhangs of double-stranded RNA. (158 aa)    
Predicted Functional Partners:
SDR06173.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Belongs to the class-II DAHP synthase family.
     
 0.812
SDQ67284.1
DivIVA domain-containing protein.
  
     0.775
SDQ84122.1
Phage shock protein A.
  
     0.774
SDR06212.1
1-acyl-sn-glycerol-3-phosphate acyltransferase.
       0.774
SDR21904.1
Chorismate mutase.
  
     0.774
SDR03976.1
PH domain-containing protein.
  
     0.771
SDQ75341.1
TLP18.3, Psb32 and MOLO-1 founding protein of phosphatase.
  
     0.769
SDQ85683.1
Protein of unknown function.
  
     0.764
SDQ77036.1
Protein of unknown function.
  
     0.758
SDR18882.1
Hypothetical protein.
  
     0.758
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.