STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR06624.1Ubiquinol-cytochrome c reductase cytochrome c subunit. (306 aa)    
Predicted Functional Partners:
SDR06644.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
 
  
 0.990
SDR06664.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
 
  
 0.989
SDR06745.1
Cytochrome c oxidase subunit 2.
 
 
 0.953
SDR06604.1
Cytochrome c oxidase subunit 3; Manually curated.
 
 
 0.943
SDR03090.1
Cytochrome c oxidase assembly protein subunit 15.
 
  
  0.849
SDR06723.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
 
     0.799
SDR24057.1
Cytochrome c biogenesis protein.
  
     0.768
SDQ57863.1
Oxidoreductase molybdopterin binding domain-containing protein.
   
 0.760
SDR26532.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
   
 0.760
SDR29028.1
Oxidoreductase molybdopterin binding domain-containing protein.
   
 0.760
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.