STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR15764.1Protein of unknown function. (75 aa)    
Predicted Functional Partners:
SDR06624.1
Ubiquinol-cytochrome c reductase cytochrome c subunit.
  
     0.698
SDR15747.1
tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like.
       0.621
SDQ73313.1
Integral membrane protein.
  
     0.574
SDQ98667.1
MerR family regulatory protein; Manually curated.
  
     0.529
SDR06664.1
Menaquinol-cytochrome c reductase cytochrome b subunit precursor.
  
     0.516
SDR14520.1
Protein-disulfide isomerase.
  
     0.512
SDQ74461.1
ABC-2 type transport system permease protein.
  
     0.506
SDR06723.1
Cytochrome c oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.
  
     0.502
SDQ86680.1
Protein of unknown function.
  
     0.500
SDR06644.1
Menaquinol-cytochrome c reductase iron-sulfur subunit precursor.
  
     0.489
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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