STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR17515.1Hypothetical protein. (111 aa)    
Predicted Functional Partners:
SDR17531.1
solute:Na+ symporter, SSS family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.940
SDR17485.1
UDPglucose--hexose-1-phosphate uridylyltransferase.
 
     0.826
SDR17467.1
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
       0.801
SDR17499.1
DNA-binding transcriptional regulator of sugar metabolism, DeoR/GlpR family.
       0.781
SDR17548.1
Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains.
       0.486
SDR17450.1
Asp/Glu/hydantoin racemase.
       0.484
SDQ57960.1
Hypothetical protein.
  
     0.472
SDQ84302.1
Hypothetical protein.
  
     0.455
SDQ57863.1
Oxidoreductase molybdopterin binding domain-containing protein.
  
     0.431
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.