STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR19329.1Dienelactone hydrolase. (284 aa)    
Predicted Functional Partners:
SDR25658.1
Hypothetical protein.
  
  
  0.809
SDR10076.1
Hypothetical protein.
  
  
  0.775
SDR15583.1
TIGR02569 family protein.
  
     0.775
SDR15822.1
Hypothetical protein.
  
     0.775
SDR17827.1
Hypothetical protein.
  
     0.775
SDR20940.1
Hypothetical protein.
  
     0.775
SDR23701.1
Hypothetical protein.
  
     0.775
SDR28830.1
Hypothetical protein.
  
     0.775
SDQ84589.1
Hypothetical protein.
  
     0.774
SDR28493.1
Septum formation.
  
     0.774
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.