STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR23752.1DNA-binding transcriptional regulator, FrmR family. (86 aa)    
Predicted Functional Partners:
SDR23762.1
Uncharacterized conserved protein, DUF302 family.
       0.783
SDR23773.1
Putative drug exporter of the RND superfamily.
       0.538
SDR23782.1
Hypothetical protein.
 
     0.519
SDR13578.1
RNA polymerase sigma-B factor; Belongs to the sigma-70 factor family.
    
   0.485
SDQ62460.1
Alcohol dehydrogenase.
  
    0.421
SDQ99986.1
Aryl-alcohol dehydrogenase.
  
    0.421
SDR26915.1
S-(hydroxymethyl)mycothiol dehydrogenase.
  
    0.421
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.