STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR27074.1N-terminal half of MaoC dehydratase. (176 aa)    
Predicted Functional Partners:
SDQ73522.1
Fatty acid synthase.
    
 0.837
SDQ61303.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase B.
  
 0.757
SDQ61278.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase A.
  
 0.756
SDQ61352.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase D.
  
 0.756
SDQ61328.1
Ketoacyl-synthetase C-terminal extension.
  
 0.663
SDQ61378.1
Phthiocerol/phenolphthiocerol synthesis type-I polyketide synthase E.
  
 0.663
SDR28242.1
Mycolic acid condensase.
     
 0.643
SDR22265.1
acetyl-CoA carboxylase carboxyl transferase subunit beta.
     
 0.617
SDQ54595.1
Phosphotransacetylase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.606
SDR12670.1
Catalase; Belongs to the catalase family.
   
  0.606
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.