STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR27855.1Adenylate cyclase. (364 aa)    
Predicted Functional Partners:
SDR08219.1
Adenylate cyclase, class 3.
  
  
0.949
SDQ50969.1
Adenylate/guanylate cyclase.
  
  
 0.948
SDR23230.1
Adenylate cyclase.
  
  
  0.888
SDR02565.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.887
SDQ48958.1
Crp-like helix-turn-helix domain-containing protein.
 
 
 0.842
SDR26937.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
   
 0.829
SDQ54645.1
Adenylate cyclase.
  
  
 0.821
SDQ50382.1
Adenylate cyclase.
  
  
 
0.744
glsA
L-glutaminase; Belongs to the glutaminase family.
   
 0.649
SDQ75258.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
    
 0.634
Your Current Organism:
Tsukamurella pulmonis
NCBI taxonomy Id: 47312
Other names: ATCC 700081, CCUG 35732, CIP 104791, DSM 44142, DSM 44990 [[Tsukamurella spongiae]], JCM 10111, JCM 14882 [[Tsukamurella spongiae]], NCTC 13230, NRRL B-24467 [[Tsukamurella spongiae]], T. pulmonis, Tsukamurella sp. K362, Tsukamurella spongiae, Tsukamurella spongiae Olson et al. 2007, strain K362 [[Tsukamurella spongiae]]
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