STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3CQP3TBP-domain-containing protein. (308 aa)    
Predicted Functional Partners:
A0A2H3DVN5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 0.999
A0A2H3DZM1
TATA-binding protein associated factor Taf2.
    
 0.999
A0A2H3DZM9
Transcription initiation factor IID, 18 kDa subunit.
   
 0.999
A0A2H3E1D6
TFIID and SAGA subunit.
    
 0.999
A0A2H3E2R3
TAF4 domain-containing protein.
    
 0.999
A0A2H3E2U4
TAF1 transcription initiation factor TFIID subunit TAF1.
    
 0.999
A0A2H3E456
Uncharacterized protein.
    
 0.999
A0A2H3E623
TFIIB-type domain-containing protein.
   
 0.999
A0A2H3E6Z8
TAFII28-domain-containing protein.
   
 0.999
A0A2H3E713
BRF1-domain-containing protein.
   
 0.999
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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