STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3CS61Uncharacterized protein. (233 aa)    
Predicted Functional Partners:
A0A2H3DEW0
TFIID-18kDa-domain-containing protein.
    
  0.758
A0A2H3DIT4
TFIID-18kDa-domain-containing protein.
    
  0.758
A0A2H3E4B1
Uncharacterized protein.
    
 0.757
A0A2H3DVP7
SCA7-domain-containing protein.
    
 0.744
A0A2H3E583
FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.730
A0A2H3CKY3
Uncharacterized protein.
    
 0.719
A0A2H3EHM5
TFIID_20kDa domain-containing protein.
    
 0.715
A0A2H3DVN5
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
  0.700
A0A2H3E1D6
TFIID and SAGA subunit.
    
 0.678
A0A2H3CAJ5
Dyp-type peroxidase.
    
  0.672
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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