A0A2H3CSS0 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3CSS0

Uncharacterized protein. (154 aa)

Predicted Functional Partners:

A0A2H3DP64

0.476

A0A2H3CQ09

0.466

A0A2H3E3H3

0.466

A0A2H3DBY4

0.460

A0A2H3DMA9

0.460

A0A2H3EFM0

0.460

A0A2H3EXM0

0.460

A0A2H3DR78

0.450

A0A2H3D1F0

0.410

A0A2H3D5D4

0.410

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CQ09	A0A2H3CSS0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.466
A0A2H3CQ09	A0A2H3D1F0	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.769
A0A2H3CQ09	A0A2H3D5D4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein.	0.769
A0A2H3CQ09	A0A2H3DBY4	ANK_REP_REGION domain-containing protein.	Uncharacterized protein; Belongs to the OSBP family.	0.568
A0A2H3CQ09	A0A2H3DMA9	ANK_REP_REGION domain-containing protein.	Zinc_ribbon_15 domain-containing protein.	0.745
A0A2H3CQ09	A0A2H3DP64	ANK_REP_REGION domain-containing protein.	Microtubule binding protein.	0.441
A0A2H3CQ09	A0A2H3E3H3	ANK_REP_REGION domain-containing protein.	Ankyrin.	0.484
A0A2H3CQ09	A0A2H3EFM0	ANK_REP_REGION domain-containing protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.745
A0A2H3CQ09	A0A2H3EXM0	ANK_REP_REGION domain-containing protein.	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	0.745
A0A2H3CSS0	A0A2H3CQ09	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.466
A0A2H3CSS0	A0A2H3D1F0	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A2H3CSS0	A0A2H3D5D4	Uncharacterized protein.	Uncharacterized protein.	0.410
A0A2H3CSS0	A0A2H3DBY4	Uncharacterized protein.	Uncharacterized protein; Belongs to the OSBP family.	0.460
A0A2H3CSS0	A0A2H3DMA9	Uncharacterized protein.	Zinc_ribbon_15 domain-containing protein.	0.460
A0A2H3CSS0	A0A2H3DP64	Uncharacterized protein.	Microtubule binding protein.	0.476
A0A2H3CSS0	A0A2H3DR78	Uncharacterized protein.	Uncharacterized protein.	0.450
A0A2H3CSS0	A0A2H3E3H3	Uncharacterized protein.	Ankyrin.	0.466
A0A2H3CSS0	A0A2H3EFM0	Uncharacterized protein.	Dynein light chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in changing or maintaining the spatial distribution of cytoskeletal structures.	0.460
A0A2H3CSS0	A0A2H3EXM0	Uncharacterized protein.	Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.	0.460
A0A2H3D1F0	A0A2H3CQ09	Uncharacterized protein.	ANK_REP_REGION domain-containing protein.	0.769