STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3CVC1P-loop containing nucleoside triphosphate hydrolase protein. (654 aa)    
Predicted Functional Partners:
A0A2H3E1Z9
Vesicular-fusion protein SEC17.
   
 0.977
A0A2H3EL11
Sec1-like protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.961
A0A2H3DLC2
Synaptobrevin.
   
 0.956
A0A2H3DYP2
t-SNARE.
    
 0.946
A0A2H3E0S7
t-SNARE.
    
 0.946
A0A2H3DVI5
t-SNARE; Belongs to the syntaxin family.
   
 0.943
A0A2H3EH59
t-SNARE.
   
 0.943
A0A2H3DFM3
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
   
 0.924
A0A2H3EVW6
Protein transport protein Sec22; Belongs to the synaptobrevin family.
    
 0.918
A0A2H3DHK0
t-SNARE coiled-coil homology domain-containing protein.
    
 0.914
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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