A0A2H3D8L6 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3D8L6

Uncharacterized protein. (853 aa)

Predicted Functional Partners:

A0A2H3E8T1

0.945

A0A2H3CKY3

0.943

A0A2H3EXW5

0.943

A0A2H3E4H3

0.942

A0A2H3D8W9

0.931

A0A2H3E583

0.930

A0A2H3E860

0.928

A0A2H3DR77

0.925

A0A2H3DUW1

0.924

A0A2H3DFE8

0.917

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CKY3	A0A2H3D8L6	Uncharacterized protein.	Uncharacterized protein.	0.943
A0A2H3CKY3	A0A2H3DUW1	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.993
A0A2H3CKY3	A0A2H3E583	Uncharacterized protein.	FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.990
A0A2H3D8L6	A0A2H3CKY3	Uncharacterized protein.	Uncharacterized protein.	0.943
A0A2H3D8L6	A0A2H3D8W9	Uncharacterized protein.	RBP11-like subunits of RNA polymerase.	0.931
A0A2H3D8L6	A0A2H3DFE8	Uncharacterized protein.	RBP11-like subunits of RNA polymerase.	0.917
A0A2H3D8L6	A0A2H3DR77	Uncharacterized protein.	NuA4-domain-containing protein.	0.925
A0A2H3D8L6	A0A2H3DUW1	Uncharacterized protein.	SGF29 C-terminal domain-containing protein.	0.924
A0A2H3D8L6	A0A2H3E4H3	Uncharacterized protein.	Myb-like domain-containing protein.	0.942
A0A2H3D8L6	A0A2H3E583	Uncharacterized protein.	FAT-domain-containing protein; Belongs to the PI3/PI4-kinase family.	0.930
A0A2H3D8L6	A0A2H3E860	Uncharacterized protein.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.928
A0A2H3D8L6	A0A2H3E8T1	Uncharacterized protein.	Rap30/74 interaction domain-containing protein.	0.945
A0A2H3D8L6	A0A2H3EXW5	Uncharacterized protein.	Uncharacterized protein.	0.943
A0A2H3D8W9	A0A2H3D8L6	RBP11-like subunits of RNA polymerase.	Uncharacterized protein.	0.931
A0A2H3D8W9	A0A2H3DFE8	RBP11-like subunits of RNA polymerase.	RBP11-like subunits of RNA polymerase.	0.999
A0A2H3D8W9	A0A2H3DUW1	RBP11-like subunits of RNA polymerase.	SGF29 C-terminal domain-containing protein.	0.530
A0A2H3D8W9	A0A2H3E860	RBP11-like subunits of RNA polymerase.	RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes.	0.565
A0A2H3D8W9	A0A2H3E8T1	RBP11-like subunits of RNA polymerase.	Rap30/74 interaction domain-containing protein.	0.992
A0A2H3D8W9	A0A2H3EXW5	RBP11-like subunits of RNA polymerase.	Uncharacterized protein.	0.993
A0A2H3DFE8	A0A2H3D8L6	RBP11-like subunits of RNA polymerase.	Uncharacterized protein.	0.917