A0A2H3D8P2 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3D8P2

Uncharacterized protein. (234 aa)

Predicted Functional Partners:

A0A2H3EH17

0.992

A0A2H3ETV8

0.990

A0A2H3DXA0

0.965

A0A2H3EKF1

0.946

A0A2H3DCJ8

0.945

A0A2H3DRL5

0.924

A0A2H3E4M0

0.919

A0A2H3E2C2

0.916

A0A2H3DNB8

0.914

A0A2H3DU03

0.912

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3D8P2	A0A2H3DCJ8	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A2H3D8P2	A0A2H3DNB8	Uncharacterized protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.914
A0A2H3D8P2	A0A2H3DRL5	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.924
A0A2H3D8P2	A0A2H3DU03	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.912
A0A2H3D8P2	A0A2H3DXA0	Uncharacterized protein.	Uncharacterized protein.	0.965
A0A2H3D8P2	A0A2H3E2C2	Uncharacterized protein.	S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.916
A0A2H3D8P2	A0A2H3E4M0	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.919
A0A2H3D8P2	A0A2H3EH17	Uncharacterized protein.	Electron transfer protein 1.	0.992
A0A2H3D8P2	A0A2H3EKF1	Uncharacterized protein.	SURF1-like protein; Probably involved in the biogenesis of the COX complex. Belongs to the SURF1 family.	0.946
A0A2H3D8P2	A0A2H3ETV8	Uncharacterized protein.	Protoheme IX farnesyltransferase, mitochondrial; Converts protoheme IX and farnesyl diphosphate to heme O. Belongs to the ubiA prenyltransferase family.	0.990
A0A2H3DCJ8	A0A2H3D8P2	Uncharacterized protein.	Uncharacterized protein.	0.945
A0A2H3DCJ8	A0A2H3DNB8	Uncharacterized protein.	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
A0A2H3DCJ8	A0A2H3DRL5	Uncharacterized protein.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.995
A0A2H3DCJ8	A0A2H3DU03	Uncharacterized protein.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999
A0A2H3DCJ8	A0A2H3E2C2	Uncharacterized protein.	S15/NS1 RNA-binding domain-containing protein; Belongs to the universal ribosomal protein uS15 family.	0.999
A0A2H3DCJ8	A0A2H3E4M0	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bS18 family.	0.995
A0A2H3DNB8	A0A2H3D8P2	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Uncharacterized protein.	0.914
A0A2H3DNB8	A0A2H3DCJ8	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Uncharacterized protein.	0.999
A0A2H3DNB8	A0A2H3DRL5	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	Ribosomal protein S12; Belongs to the universal ribosomal protein uS12 family.	0.998
A0A2H3DNB8	A0A2H3DU03	Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.	0.999