STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3DDK8RING-type domain-containing protein. (723 aa)    
Predicted Functional Partners:
A0A2H3EBG3
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
    
 
 0.841
A0A2H3E5D8
Sec63-domain-containing protein.
    
 
 0.786
A0A2H3DZ00
GYF domain-containing protein.
    
 
 0.763
A0A2H3D269
RING-type domain-containing protein.
    
 
 0.745
A0A2H3EL00
WD-repeat protein.
 
      0.729
A0A2H3E408
EF Tu GTP binding domain-containing protein.
    
 
 0.711
A0A2H3CA21
Uncharacterized protein.
    
 
 0.693
A0A2H3CUW4
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
    
 
 0.693
A0A2H3EHI8
Uncharacterized protein.
    
 
 0.693
A0A2H3DVK1
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
    0.665
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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