STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3DFY0Sphingolipid C9-methyltransferase. (481 aa)    
Predicted Functional Partners:
A0A2H3DE70
Uncharacterized protein; Belongs to the EF-1-beta/EF-1-delta family.
   
 0.944
A0A2H3E0V5
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.888
A0A2H3EYG4
Methionyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.831
A0A2H3CRE5
Elongation factor 1-gamma.
   
 0.824
A0A2H3D865
Uncharacterized protein.
   
 
 0.823
A0A2H3DCJ3
Glutamate-tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.816
A0A2H3DL18
Glutamyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.816
A0A2H3D8W9
RBP11-like subunits of RNA polymerase.
   
 
 0.813
A0A2H3DYL4
RPOLD domain-containing protein.
   
 
 0.813
A0A2H3DY89
Prolyl-tRNA synthetase.
   
 0.805
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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