A0A2H3DL49 protein (Armillaria gallica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A2H3DL49

Uncharacterized protein. (529 aa)

Predicted Functional Partners:

A0A2H3E0G2

0.906

A0A2H3E1U1

0.898

A0A2H3CQG5

0.893

A0A2H3DPD7

0.893

A0A2H3D2Z5

0.856

A0A2H3DQ96

0.856

A0A2H3E058

0.856

A0A2H3DXF1

0.855

A0A2H3ERQ8

0.819

A0A2H3E7X3

0.818

Your Current Organism:

Armillaria gallica

NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A2H3CQG5	A0A2H3DL49	Pre-mRNA-splicing factor ISY1.	Uncharacterized protein.	0.893
A0A2H3D2Z5	A0A2H3DL49	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2H3D2Z5	A0A2H3DXF1	Uncharacterized protein.	Inhibitor of apoptosis repeat-containing protein.	0.488
A0A2H3D2Z5	A0A2H3E1U1	Uncharacterized protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.764
A0A2H3D2Z5	A0A2H3E7X3	Uncharacterized protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.728
A0A2H3DL49	A0A2H3CQG5	Uncharacterized protein.	Pre-mRNA-splicing factor ISY1.	0.893
A0A2H3DL49	A0A2H3D2Z5	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2H3DL49	A0A2H3DPD7	Uncharacterized protein.	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	0.893
A0A2H3DL49	A0A2H3DQ96	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2H3DL49	A0A2H3DXF1	Uncharacterized protein.	Inhibitor of apoptosis repeat-containing protein.	0.855
A0A2H3DL49	A0A2H3E058	Uncharacterized protein.	E3 ubiquitin ligase SCF complex, Skp subunit; Belongs to the SKP1 family.	0.856
A0A2H3DL49	A0A2H3E0G2	Uncharacterized protein.	Mob1/phocein.	0.906
A0A2H3DL49	A0A2H3E1U1	Uncharacterized protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.898
A0A2H3DL49	A0A2H3E7X3	Uncharacterized protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.818
A0A2H3DL49	A0A2H3ERQ8	Uncharacterized protein.	Uncharacterized protein.	0.819
A0A2H3DPD7	A0A2H3DL49	Transcription elongation factor Spt6; Plays a role in maintenance of chromatin structure during RNA polymerase II transcription elongation thereby repressing transcription initiation from cryptic promoters. Mediates the reassembly of nucleosomes onto the promoters of at least a selected set of genes during repression; the nucleosome reassembly is essential for transcriptional repression; Belongs to the SPT6 family.	Uncharacterized protein.	0.893
A0A2H3DQ96	A0A2H3DL49	Uncharacterized protein.	Uncharacterized protein.	0.856
A0A2H3DQ96	A0A2H3DXF1	Uncharacterized protein.	Inhibitor of apoptosis repeat-containing protein.	0.488
A0A2H3DQ96	A0A2H3E1U1	Uncharacterized protein.	Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.	0.764
A0A2H3DQ96	A0A2H3E7X3	Uncharacterized protein.	Kinase-like protein; Belongs to the protein kinase superfamily.	0.728