STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3DRR5Clavaminate synthase-like protein. (396 aa)    
Predicted Functional Partners:
A0A2H3E3U1
P-loop containing nucleoside triphosphate hydrolase protein.
    
 0.950
A0A2H3DVZ0
Uncharacterized protein.
   
 0.660
A0A2H3DZP4
Uncharacterized protein.
   
 0.660
A0A2H3ET54
dUTP pyrophosphatase.
   
 0.660
A0A2H3D8L0
DNA repair protein rad10.
    
 0.634
A0A2H3E3K9
Polyubiquitin-tagged protein recognition complex, Npl4 component.
    
  0.620
A0A2H3CKU1
Nuclear transport factor 2.
    
 0.611
A0A2H3DQA3
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
  0.607
A0A2H3DVA3
Uncharacterized protein.
    
  0.607
A0A2H3DDU4
Uncharacterized protein.
    
 0.561
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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