STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3DUA4Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (342 aa)    
Predicted Functional Partners:
A0A2H3DUE3
Nucleic acid-binding protein.
 
      0.786
A0A2H3DMS5
Uncharacterized protein.
    
 0.731
A0A2H3CPB1
Uncharacterized protein.
   
 0.689
A0A2H3CUE9
Autophagy-related protein 13; Belongs to the ATG13 family. Fungi subfamily.
   
 0.689
A0A2H3CFE7
Clavaminate synthase-like protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
 0.488
A0A2H3D649
Other/ULK/ULK protein kinase.
    
 
 0.477
A0A2H3D642
Clavaminate synthase-like protein.
  
     0.427
A0A2H3DMQ7
Gibberellin 2-oxidase.
  
     0.421
A0A2H3E6T2
Protein YIP.
    
 
 0.416
A0A2H3DFM3
Coatomer subunit beta; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins.
    
   0.407
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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