STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2H3DUZ0Uncharacterized protein. (252 aa)    
Predicted Functional Partners:
A0A2H3DQ76
DUF1715-domain-containing protein.
   
 
 0.935
A0A2H3CFY4
P-loop containing nucleoside triphosphate hydrolase protein.
    
 
 0.830
A0A2H3CIJ1
tRNA ligase.
   
  
 0.523
A0A2H3ET71
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
  
 0.517
A0A2H3DN78
tRNA-splicing endonuclease subunit Sen34; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structura [...]
      
 0.465
A0A2H3D989
Uncharacterized protein.
   
 
 0.431
A0A2H3DGR2
Uncharacterized protein.
   
 
 0.431
A0A2H3DRI5
Uncharacterized protein.
   
 
 0.431
A0A2H3DTV4
PH domain-containing protein.
   
 
 0.431
A0A2H3EMW2
Threonyl-tRNA synthetase.
   
 
 0.431
Your Current Organism:
Armillaria gallica
NCBI taxonomy Id: 47427
Other names: A. gallica, Armillaria bulbosa, Armillaria lutea
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